vg
tools for working with variation graphs
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Here is a list of all functions with links to the classes they belong to:
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~
- n -
nearest_ref_pos() :
vg::Surjector
NegationFlagArgSpec() :
vg::subcommand::NegationFlagArgSpec< Receiver >
NestedCachedPackedTraversalSupportFinder() :
vg::NestedCachedPackedTraversalSupportFinder
NestedFlowCaller() :
vg::NestedFlowCaller
nesting_info_headers() :
vg::VCFOutputCaller
net_graph_of() :
vg::SnarlManager
NetGraph() :
vg::NetGraph
new_height() :
haplo::hDP_gbwt_graph_accessor< GBWTType >
new_length() :
haplo::hDP_gbwt_graph_accessor< GBWTType >
new_side() :
haplo::hDP_gbwt_graph_accessor< GBWTType >
next() :
vg::connection_t
,
vg::subpath_t
,
vg::WFATree
,
vg::WindowedVcfBuffer
next_empty_alignment() :
vg::BandedGlobalAligner< IntType >::AltTracebackStack
next_is_empty() :
vg::BandedGlobalAligner< IntType >::AltTracebackStack
next_pos_chars() :
vg::Sampler
next_score() :
vg::WFATree
next_size() :
vg::subpath_t
next_snarl() :
vg::SnarlManager
next_traceback_alignment() :
vg::BandedGlobalAligner< IntType >::AltTracebackStack
NGSSimulator() :
vg::NGSSimulator
no_chain_info() :
vg::MinimizerMapper
no_pos() :
vg::WFATree
node() :
vg::MatchPos
node_count() :
vg::VG
node_count_next() :
vg::VG
node_count_prev() :
vg::VG
node_id() :
vg::mapping_t
,
vg::position_t
node_index() :
vg::Packer
node_is_invalid() :
vg::ZipCodeTree
node_length() :
vg::PathIndex
,
vg::Sampler
node_offset() :
vg::Viz
node_path_traversal_counts() :
vg::Paths
node_path_traversals() :
vg::Paths
node_quality_bin_offset() :
vg::Packer
node_quality_bin_size() :
vg::Packer
node_quality_vector_size() :
vg::Packer
node_rank() :
vg::VG
node_starts_in_path() :
vg::VG
node_to_snarl() :
vg::SnarlGraph
nodelength() :
haplo::gbwt_thread_t
nodes_before_offset() :
vg::Viz
nodes_next() :
vg::VG
nodes_prev() :
vg::VG
NodeSide() :
vg::NodeSide
NodeTraversal() :
vg::NodeTraversal
non_intermediate_aliases() :
vg::AliasGraph
nondisjoint() :
haplo::int_itvl_t
nonoverlapping_node_context_without_paths() :
vg::VG
normal_distribution() :
vg::normal_distribution< T >
nowhere() :
vg::algorithms::TracedScore
nth_copy_of_handle() :
vg::DagifiedGraph
NullClusterer() :
vg::NullClusterer
NullMaskingGraph() :
vg::NullMaskingGraph
num_haplotypes() :
vg::PhasedGenome
num_snarls() :
vg::SnarlManager
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